Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548e in AD Lung Bhattacharjee Cluster 46 Table contains all genes in the AD Lung Bhattacharjee cluster number 46. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548e 7324 UBE2E1 ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast) [Source:HGNC Symbol;Acc:12477] zzz999 901 CCNG2 cyclin G2 [Source:HGNC Symbol;Acc:1593] zzz999 7398 USP1 ubiquitin specific peptidase 1 [Source:HGNC Symbol;Acc:12607] T 29978 UBQLN2 ubiquilin 2 [Source:HGNC Symbol;Acc:12509] zzz999 9926 LPGAT1 lysophosphatidylglycerol acyltransferase 1 [Source:HGNC Symbol;Acc:28985] T 950 SCARB2 scavenger receptor class B, member 2 [Source:HGNC Symbol;Acc:1665] zzz999 5701 PSMC2 proteasome (prosome, macropain) 26S subunit, ATPase, 2 [Source:HGNC Symbol;Acc:9548] zzz999 51031 GLOD4 glyoxalase domain containing 4 [Source:HGNC Symbol;Acc:14111] zzz999 5781 PTPN11 protein tyrosine phosphatase, non-receptor type 11 [Source:HGNC Symbol;Acc:9644] T 5431 POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa [Source:HGNC Symbol;Acc:9188] zzz999 9444 QKI quaking homolog, KH domain RNA binding (mouse) [Source:HGNC Symbol;Acc:21100] P T 6814 STXBP3 syntaxin binding protein 3 [Source:HGNC Symbol;Acc:11446] zzz999 22992 KDM2A lysine (K)-specific demethylase 2A [Source:HGNC Symbol;Acc:13606] P T 23376 KIAA0776 KIAA0776 [Source:HGNC Symbol;Acc:23039] zzz999 65117 RSRC2 arginine/serine-rich coiled-coil 2 [Source:HGNC Symbol;Acc:30559] zzz999 102 ADAM10 ADAM metallopeptidase domain 10 [Source:HGNC Symbol;Acc:188] P T 253635 CCDC75 coiled-coil domain containing 75 [Source:HGNC Symbol;Acc:26768] zzz999 93487 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1-like [Source:HGNC Symbol;Acc:19840] P 1213 CLTC clathrin, heavy chain (Hc) [Source:HGNC Symbol;Acc:2092] P T 10500 SEMA6C sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C [Source:HGNC Symbol;Acc:10740] zzz999 27316 RBMX RNA binding motif protein, X-linked [Source:HGNC Symbol;Acc:9910] zzz999 3188 HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H') [Source:HGNC Symbol;Acc:5042] P T 10955 SERINC3 serine incorporator 3 [Source:HGNC Symbol;Acc:11699] T 9352 TXNL1 thioredoxin-like 1 [Source:HGNC Symbol;Acc:12436] zzz999 5706 PSMC6 proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Source:HGNC Symbol;Acc:9553] zzz999 10042 HMGXB4 HMG box domain containing 4 [Source:HGNC Symbol;Acc:5003] P T 10951 CBX1 chromobox homolog 1 [Source:HGNC Symbol;Acc:1551] P 3920 LAMP2 lysosomal-associated membrane protein 2 [Source:HGNC Symbol;Acc:6501] zzz999 5955 RCN2 reticulocalbin 2, EF-hand calcium binding domain [Source:HGNC Symbol;Acc:9935] zzz999 23512 SUZ12 suppressor of zeste 12 homolog (Drosophila) [Source:HGNC Symbol;Acc:17101] zzz999 9562 MINPP1 multiple inositol-polyphosphate phosphatase 1 [Source:HGNC Symbol;Acc:7102] zzz999 10228 STX6 syntaxin 6 [Source:HGNC Symbol;Acc:11441] T 22872 SEC31A SEC31 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:17052] zzz999 6670 SP3 Sp3 transcription factor [Source:HGNC Symbol;Acc:11208] P 10427 SEC24B SEC24 family, member B (S. cerevisiae) [Source:HGNC Symbol;Acc:10704] zzz999 22920 KIFAP3 kinesin-associated protein 3 [Source:HGNC Symbol;Acc:17060] zzz999 51351 ZNF117 zinc finger protein 117 [Source:HGNC Symbol;Acc:12897] zzz999 7417 VDAC2 voltage-dependent anion channel 2 [Source:HGNC Symbol;Acc:12672] zzz999 9425 CDYL chromodomain protein, Y-like [Source:HGNC Symbol;Acc:1811] P T 9320 TRIP12 thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:12306] zzz999 3359 HTR3A 5-hydroxytryptamine (serotonin) receptor 3A [Source:HGNC Symbol;Acc:5297] zzz999 3576 IL8 interleukin 8 [Source:HGNC Symbol;Acc:6025] zzz999 140890 SREK1 splicing regulatory glutamine/lysine-rich protein 1 [Source:HGNC Symbol;Acc:17882] P T 7321 UBE2D1 ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) [Source:HGNC Symbol;Acc:12474] P 10146 G3BP1 GTPase activating protein (SH3 domain) binding protein 1 [Source:HGNC Symbol;Acc:30292] zzz999 372 ARCN1 archain 1 [Source:HGNC Symbol;Acc:649] P 23175 LPIN1 lipin 1 [Source:HGNC Symbol;Acc:13345] T 8895 CPNE3 copine III [Source:HGNC Symbol;Acc:2316] P 10006 ABI1 abl-interactor 1 [Source:HGNC Symbol;Acc:11320] zzz999 2589 GALNT1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) [Source:HGNC Symbol;Acc:4123] zzz999 10928 RALBP1 ralA binding protein 1 [Source:HGNC Symbol;Acc:9841] P T 522 ATP5J ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 [Source:HGNC Symbol;Acc:847] zzz999 7555 CNBP CCHC-type zinc finger, nucleic acid binding protein [Source:HGNC Symbol;Acc:13164] P 10664 CTCF CCCTC-binding factor (zinc finger protein) [Source:HGNC Symbol;Acc:13723] T 6868 ADAM17 ADAM metallopeptidase domain 17 [Source:HGNC Symbol;Acc:195] zzz999 11011 TLK2 tousled-like kinase 2 [Source:HGNC Symbol;Acc:11842] zzz999 2958 GTF2A2 general transcription factor IIA, 2, 12kDa [Source:HGNC Symbol;Acc:4647] zzz999 8813 DPM1 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit [Source:HGNC Symbol;Acc:3005] zzz999 10935 PRDX3 peroxiredoxin 3 [Source:HGNC Symbol;Acc:9354] zzz999 9859 CEP170 centrosomal protein 170kDa [Source:HGNC Symbol;Acc:28920] zzz999 9972 NUP153 nucleoporin 153kDa [Source:HGNC Symbol;Acc:8062] P 4594 MUT methylmalonyl CoA mutase [Source:HGNC Symbol;Acc:7526] zzz999 6426 SRSF1 serine/arginine-rich splicing factor 1 [Source:HGNC Symbol;Acc:10780] P T 10762 NUP50 nucleoporin 50kDa [Source:HGNC Symbol;Acc:8065] T 6902 TBCA tubulin folding cofactor A [Source:HGNC Symbol;Acc:11579] zzz999 6728 SRP19 signal recognition particle 19kDa [Source:HGNC Symbol;Acc:11300] zzz999 1386 ATF2 activating transcription factor 2 [Source:HGNC Symbol;Acc:784] P T 81688 C6orf62 chromosome 6 open reading frame 62 [Source:HGNC Symbol;Acc:20998] P T 8943 AP3D1 adaptor-related protein complex 3, delta 1 subunit [Source:HGNC Symbol;Acc:568] zzz999

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